Aditi Shenoy

PhD Candidate in Protein Bioinformatics and Machine Learning

Recent posts

Dec 13, 2022
CASP 15 Day-4 The assessment of predicted models is almost as important as the prediction itself. It would be hard to trust predictions if we don’t know how good they are when the native structure is not known.…
Dec 12, 2022
CASP 15 Day-3 RNA structure The standard metric used for assessing the RNA structure (in terms of watson pairs, non-watson pairs and coaxial stacking) was RMSD.…
Dec 11, 2022
CASP 15 Day-2 Overview talk 1 : Mapping machine learning to protein structure problems (John Jumper) The talk broadly covered 3 categories: Generative modelling (Diffusion models):…
Dec 10, 2022
CASP 15 Day-1 Expanding criteria for review John Moult proposes a way to add evaluation criteria (e.g. reproducibility, robustness, training bias, suitability for benchmarking) for method-based and application-based papers.…
May 21, 2020
Installing Nvidia Driver and Cuda in a Singularity Container Installing Nvidia Drivers and Cuda on a Linux machine can be a tricky affair. Though it is possible to install both the nvidia-driver and the nvidia-cuda-toolkit using a package manager, it could result in incompatibile versions and could potentially break the graphics or operating system.…
Apr 24, 2020
“Wi-Fi: No Hardware Installed“ - What to do? Over the past couple of weeks I had been getting an error with the Wi-fi on my Macbook Air (2017). There was an ‘x’ in the Wi-fi symbol and on clicking the icon, the message read “Wi-Fi: No Hardware Installed”.…
Apr 24, 2020
Could these global health problems soon become your problems? Across the world, technologies are being increasingly used to maximize productivity in the clinical space. Being a part of this change and learning to adapt to it would be of utmost importance in the coming years with the pressing challenges of the current healthcare systems in the world.…